Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015828032.1_cds_XP_016503282.1_16839
CDS Infomation

[gene=LOC107821357] [db_xref=GeneID:107821357] [protein=coiled-coil domain-containing protein SCD2-like isoform X3] [protein_id=XP_016503282.1] [location=complement(join(39615..39685,42521..42647,43055..43095,50336..50405,51027..51145,51235..51351,52015..52075,52162..52272,52350..52424,52873..52900,53013..53062,53767..53829,53925..53966,54132..54207,54617..54789,55274..55681))] [gbkey=CDS]
Sequence

ATGGATCGGGCGAGAACAGCAAGTCCAAGGCAGTTAAGGAAATGGAGCAGCGAATCCGGA
GCAGCTCCGACTCTGATTTCCGGGTCTTCATCACCTGGACGTCCACATCATCATGGCCGG
TCTTCCTCAGTCTCCGGCGGCATGATGTCCAACATTAAGCGCACTCAGAATGTTGCTGCA
AAAGCTGCTGCCCAGCGCCTCGCTCAAGTCATGGCCTCACAAGCTGCTTCTGCTGGTAAT
GACGATGACGACGATGATAATGATGATCTTGGATTCCGATTTGCACCTCCCTCTTTTTCC
CGTTCCAACGGCACTAGTGCTACCGACAACACTAATGCTACCAACAACACTAATGCTGCG
GCTATTCAGTCCGCTAAGCTCAATAATAGTAGATCATCTTCCCCTCTGCTAGCTAGGAAT
TTTGTTGAGGAAAACCCGTCGTCTCTTCGTTCAACATCAGCAGGAAGAGCAAATGTGCCA
ACTCGTCCTCCACCATCAATACCAAGTACCCGACAGCCTGTGAAGACTCCTTCACCTATA
CCCCCAATCGAGCCTCCAACCAACAAGCTGAGAGAGAAAAGATTCTCGCCAGATTTAAGA
CAATTTAACTTGAAAGATACAGGAGATAACCGTGCTGCTTCTGCGCTTCATGATGAACTT
GATATGCTACAAGAAGAAAATGAAAATCTGCTTGGAAAGCTTAGAGGTACTGAAATGAGT
TACGATGAAGCAGAAGCTAGAGTGAAGGAGCTTGAGAAACAGGTTGCAGCACTTGGAGAA
GGAGTATCTTTAGAAGCAAAGTTGTTAAGCAGGAAGGAAGCCTCTTTGCGCCAAAGGGAG
GCTGCACTGAAAGACGCAAAACAAGCCAAGAATGGGATAGATGTGGAACTTGCAAACCTC
TGTTCTAATGTTCAGAAAGCAAAAGAGGACGCAGCTGCTGCTGTATATCAACTTCAAGGG
GCTGAATCTGAGGTTAAAACTCTACGCTCTATGACACAAAGGATGGTTTTAACCCAGAAT
GAGATGGAAGATGTTGTTCTTAAAAGATGCTGGCTTGCACGTTATTGGGGTTTAGCAGCT
CAGTTTGGTATTTGTGCAGATATTGCTGCTTCAAAACACGAGTACTGGTCATCCTTTGCA
CCTCTTCCTTTTGAATTGGTTATCTCTGCTGGACAAAAGGCAAAGGAAGAATTTTTGGAA
AAAGGTTATGACAATCCAGAGAGGGGTAATCTTGTTCGGGATTTGAATGATCTCACTGGA
GAAGGAAATATAGAAAGCATGCTTTCTGTTGAAATGGGCTTGAATGAACTTGTTTCCTTG
AAGGTTGAGGATGCCATAGTGCTTGCACTGGCTCAACAACGACGTCCAAACTCCACTCGA
ACATCAATTTCAGAACTCAGCCCCGAGGAGTCTGAAGATGTCCTTTTCAAGGAGGCATGG
CTAACTTACTTTTGGAGGAGAGCCAAAGCTCATGGTATACAGGAGGATAAAGCCAATAAA
AATTTTCAATTTTGGAGTAGTCGCAGCGGGCACGCACCAACTTCTCATGACGCTGTTGAT
GTTGAGCAAGGTCTGATGGAGCTAAGGAAGTTGGGCATTGAACAAAAACTATGGGAATCA
TCTCGGAGATAA

Peptide Sequence

PEP ID

XP_016503282.1
PEP Infomation

PREDICTED: coiled-coil domain-containing protein SCD2-like isoform X3 [Nicotiana tabacum]
Sequence

MDRARTASPRQLRKWSSESGAAPTLISGSSSPGRPHHHGRSSSVSGGMMSNIKRTQNVAA
KAAAQRLAQVMASQAASAGNDDDDDDNDDLGFRFAPPSFSRSNGTSATDNTNATNNTNAA
AIQSAKLNNSRSSSPLLARNFVEENPSSLRSTSAGRANVPTRPPPSIPSTRQPVKTPSPI
PPIEPPTNKLREKRFSPDLRQFNLKDTGDNRAASALHDELDMLQEENENLLGKLRGTEMS
YDEAEARVKELEKQVAALGEGVSLEAKLLSRKEASLRQREAALKDAKQAKNGIDVELANL
CSNVQKAKEDAAAAVYQLQGAESEVKTLRSMTQRMVLTQNEMEDVVLKRCWLARYWGLAA
QFGICADIAASKHEYWSSFAPLPFELVISAGQKAKEEFLEKGYDNPERGNLVRDLNDLTG
EGNIESMLSVEMGLNELVSLKVEDAIVLALAQQRRPNSTRTSISELSPEESEDVLFKEAW
LTYFWRRAKAHGIQEDKANKNFQFWSSRSGHAPTSHDAVDVEQGLMELRKLGIEQKLWES
SRR

Transcript Sequence

Gene sequence data has not been registered.